3 month CD rates at EverBank have a new higher rate. EverBank 3 month CD rates are now at 0.78 percent with a yield of 0.78 percent. The old 3 month CD rate at EverBank was 0.55 percent with a yield of 0.55 percent. View a history of interest rate changes to the 90 day certificate of deposit at EverBank by visiting EverBank 3 Month CD Rates.